Table 2 Characterization of the Mb-scale genomic region under balancing selection in weedy rice.
From: Genomic variation associated with local adaptation of weedy rice during de-domestication
Item\group type | indica (Jiangsu: 38 samples) |
|---|---|
Chromosome | Chr.5 |
Genomic position (Mb) | 9.2–13.5 |
Region size (Mb) | 4.4 |
Average π values (× 10−3)* | 2.5/0.6 |
Top Tajima’s values* | 3.3/1.7 |
Average Tajima’s values* | 2.9/−1.8 |
Number of windows with Tajima's D>2* | 43/0 |
Percentage of top 5% high Tajima’s D windows | 90.9% |
Percentage of windows within Z(Fst)≥3 across the genome | 88.4% |
Number of non-TE genes covered | 213 |
Number of non-TE genes with Tajima’s D>2* | 132/4 |
