Extended Data Fig. 9: Gene-level correlation with validation measurements.
From: Compressed sensing for highly efficient imaging transcriptomics
For each gene (individual dots) validated in each tissue (colors) the correlation across all segmented cells (y-axis) between values recovered by CISI and directly measured values is plotted vs the average expression level (TPM) in cells expressing the gene in scRNA-Seq (x-axis, left), or the percentage of cells expressing the gene (x-axis, right). Individual data points labeled by gene are provided in Supplementary Table 10.
