Table 1 Microsatellites used for genotyping the 28 cork oak individuals for selection of the tree used in genome sequencing.

From: The draft genome sequence of cork oak

Reference

  

Size (bp)

 

Locus

Motif

Expected

Observed

Ueno and Tsumura7

QrOST1 (DN950446)

(AG)19

149–171

134–152

 

QpD12 (CR627959)

(GCA)7

243–251

240–254

Steinkellner et al.8

QpZAG110

(AG)15

206–262

200–260

 

QpZAG9

(AG)12

182–210

223–249

 

QpZAG15

(AG)23

108–152

101–135

 

QpZAG36

(AG)19

210–236

205–231

 

QpZAG46

(AG)13

190–222

180–200

Kampfer et al.

QrZAG20

(TC)18

160–200

161–179

 

QrZAG7

(TC)17

115–153

115–133

 

QrZAG11

(TC)22

238–263

255–281

Dow et al. 10

MSQ4

(AG)17

203–227

186–218

 

MSQ13

(TC)11

222–246

218–230

Isagi and Suhandono11

QM3-50/QM50-3M

Composite

253

273–289

Sebastiani et al.12

Cmcs1

(AT)7

104–108

104–123

CEBAL

CB01

(TC)2

-

88–106

INIAV

D8

(CA)20

141–151

139–155

  1. For each microsatellite the motif, as well as the expected and observed sizes, are indicated.
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