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Showing 1–6 of 6 results
Advanced filters: Author: "Alfonso Valencia" Clear advanced filters
  • Here, the authors evaluate the performance of AlphaFold2 and its predicted structures on common structural biological applications, including missense variants, function and ligand binding site prediction, modeling of interactions and modeling of experimental structural data.

    • Mehmet Akdel
    • Douglas E. V. Pires
    • Pedro Beltrao
    ResearchOpen Access
    Nature Structural & Molecular Biology
    Volume: 29, P: 1056-1067
  • Disease comorbidity is attracting increasing attention, but the involvement of molecular factors in forecasting risk of a disease in the presence of other diseases is poorly understood. Here the authors build a disease interaction network based on gene expression profile and discover new comorbidity relationships in patient subgroups.

    • Jon Sánchez-Valle
    • Héctor Tejero
    • Alfonso Valencia
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-13
  • Functional interactions between proteins and within proteins results in co-evolutionary signatures in amino acid sequences that serve as clues to various forms of interdependence. This Review discusses the principles and distinctions of the large range of computational tools to analyse protein co-evolution and the biological insight that they are providing.

    • David de Juan
    • Florencio Pazos
    • Alfonso Valencia
    Reviews
    Nature Reviews Genetics
    Volume: 14, P: 249-261
    • Janet M Thornton
    • Alfonso Valencia
    • Torsten Schwede
    Comments & Opinion
    Nature Structural & Molecular Biology
    Volume: 24, P: 431-432